PlantPhoneDB Documentation!

Welcome! This is the documentation for PlantPhoneDB, a manually curated pan-plant database of ligand-receptor pairs infers cell-cell communication. The web sever address is located here. PlantPhoneDB is freely accessible for all users.

Overview

• Home
• Search
• Explorer
  • Overview
  • chordDiagram
  • network-graph
  • heatmap plot
  • dot plot
  • Top 10 LR pairs
  • Pathway
• Download
  • Ligand-Receptor Interaction Pairs
  • Expression matrix
• References
• Document
• About
• Case Studies
  • Case 1. Significant cell-cell interactions of Heat-Shocked Root Cells in Arabidopsis thaliana
  • Case 2. Compare the number of interactions among cell types between two datasets (93-11 and Nipponbare)
• Software
  • PlantPhoneDB installation
  • Ligand-receptor pairs
• Citation